SNP ID | Primer sequences* | Genotyping method (restriction endonuclease) | PCR- RFLP products length (bp) | Reference† |
---|---|---|---|---|
rs699947 | Fw 5'-GCCTTAGGACACCATACCGATG-3' Rv 5'-GCTGCCCCAGGGAACAAAGTTG-3' | PCR/RFLP (Bgl II) | CC: 285 CA: 285,206,79 AA: 206,79 | Modified from [3] |
rs1570360 | Fw 5'-TCCTGCTCCCTCCTCGCCAATG-3' Rv 5'-GGCGGGGACAGGCGAGCATCAG-3' | PCR/RFLP (Mnl I) | AA: 206 AG: 206,180,26 GG: 180,26 | Modified from [19] |
rs2010963 | Fw 5'-CCGACGGCTTGGGGAGATTGCTC-3' Rv 5'-CGGCGGTCACCCCCAAAAGCAG-3' | PCR/RFLP (BsmF 1) | GG:157, 40 GC: 197,157,40 CC: 197 | Modified from [3] |
rs25648 | ---- | Real time PCR Taqman assay | ---- | hCV791476 |